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CAZyme Gene Cluster: MGYG000001378_4|CGC1
CGC gene composition diagram |
Gene composition table |
Substrate predicted by eCAMI subfamily |
Substrate predicted by dbCAN-PUL search |
Genomic context
CGC gene composition diagram
Gene composition table
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
|---|---|---|---|---|---|---|
| MGYG000001378_02207 | TonB-dependent receptor SusC |
TC | 3223 | 6402 | + | 1.B.14.6.1 |
| MGYG000001378_02208 | hypothetical protein |
null | 6424 | 8436 | + | SusD-like_3| SusD_RagB |
| MGYG000001378_02209 | hypothetical protein |
TC | 8474 | 11533 | + | 1.B.14.6.1 |
| MGYG000001378_02210 | hypothetical protein |
null | 11555 | 13276 | + | SusD-like_3| SusD_RagB |
| MGYG000001378_02211 | Rhamnogalacturonan endolyase YesW |
CAZyme | 13357 | 15498 | + | PL11 |
| MGYG000001378_02212 | hypothetical protein |
CAZyme | 15669 | 19085 | + | PL26 |
| MGYG000001378_02213 | hypothetical protein |
CAZyme | 19403 | 20947 | - | CE12 |
| MGYG000001378_02214 | hypothetical protein |
CAZyme | 21167 | 22309 | - | GH105 |
| MGYG000001378_02215 | Rhamnogalacturonan exolyase YesX |
CAZyme | 22554 | 24395 | + | CBM13| CBM35| CBM2| PL11_1| PL11 |
| MGYG000001378_02216 | hypothetical protein |
CAZyme | 24399 | 25808 | + | GH105 |
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
Substrate predicted by eCAMI subfamilies is pectin
| Protein ID | eCAMI subfam | CAZyme substrate |
|---|---|---|
| MGYG000001378_02211 | ||
| MGYG000001378_02212 | PL26_e1|4.2.2.24 | pectin |
| MGYG000001378_02213 | CE12_e40 | |
| MGYG000001378_02214 | GH105_e14|3.2.1.172 | pectin |
| MGYG000001378_02215 | PL11_e0|CBM35_e56|CBM2_e72|CBM13_e93|4.2.2.23 | pectin |
| MGYG000001378_02216 | GH105_e35|3.2.1.172 | pectin |
Substrate predicted by dbCAN-PUL is pectin download this fig
